Author Publications

2010

Wassink, Ingo (2010) Work flows in life science. thesis.

Wassink, Ingo and Ooms, Matthijs and Neerincx, Pieter and Veer van der, Gerrit and Rauwerda, Han and Leunissen, Jack A.M. and Breit, Timo M. and Nijholt, Anton and Vet van der, Paul (2010) e-BioFlow: improving practical use of workflow systems in bioinformatics. In: Information Technology in Bio- and Medical Informatics, ITBAM 2010, September 1-2, 2010, Bilbao, Spain.

2009

Wassink, Ingo and Ooms, Matthijs and Vet van der, Paul (2009) Designing Workflows on the Fly Using e-BioFlow. In: 7th International Joint Conference on Service-Oriented Computing, ICSOC-ServiceWave, 23-27 Nov 2009, Stockholm, Sweden.

Wassink, I. and Rauwerda, H. and Neerincx, P.B.T. and van der Vet, P.E. and Breit, T.M. and Leunissen, J.A.M. and Nijholt, A. (2009) Using R in Taverna: RShell v1.2. BMC Research Notes, 2 (138). pp. 1-5. ISSN 1756-0500

Wassink, I. and van der Vet, P.E. and Wolstencroft, K. and Neerincx, P.B.T. and Roos, M. and Rauwerda, H. and Breit, T.M. (2009) Analysing scientific workflows: why workflows not only connect web services. In: IEEE Congress on Services 2009, 06-10 Jul 2009, Los Angeles, CA, USA.

Wassink, I. and van der Vet, P.E. and van der Veer, G.C. and Roos, M. and van Dijk, E.M.A.G. (2009) New Interactions with Workflow Systems. In: Designing beyond the Product-Understanding Activity and User Experience in Ubiquitous Environments, 30 Sept - 02 Oct 2009, Helsinki, Finland.

2008

Kulyk, O. and Wassink, I. and van der Vet, P.E. and van der Veer, G.C. and van Dijk, E.M.A.G. (2008) Sticks, balls or a ribbon? Results of a formative user study with bioinformaticians. [Report]

Li, P. and Castrillo, J.I. and Velarde, G. and Wassink, I. and Soiland-Reyes, S. and Owen, S. and Withers, D. and Oinn, T. and Pocock, M.R. and Goble, C.A. and Oliver, S.G. and Kell, D.B. (2008) Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data. BMC Bioinformatics, 9 (334). pp. 1-38. ISSN 1471-2105

Wassink, I. and Kulyk, O. and van Dijk, E.M.A.G. and van der Veer, G.C. and van der Vet, P.E. (2008) Applying a User-centred Approach to Interactive Visualization Design. In: Trends in Interactive Visualization. Advanced Information and Knowledge Processing . Springer Verlag, London. ISBN 9781848002685

Wassink, I. and Rauwerda, H. and van der Vet, P.E. and Breit, T. and Nijholt, A. (2008) E-BioFlow: Different Perspectives on Scientific Workflows. In: Bioinformatics Research and Development, BIRD 2008, 07-09 Jul 2008, Vienna, Austria.

2007

Kulyk, O. and Kosara, R. and Urquiza, J. and Wassink, I. (2007) Human-Centered Aspects. In: Human-Centered Visualization Environments. Lecture Notes in Computer Science Tutorial, 4417 . Springer Verlag, Berlin, pp. 13-75. ISBN 9783540719489

Vet van der, Paul and Kulyk, Olga and Wassink, Ingo and Fikkert, Wim and Rauwerda, Han and Dijk van, Betsy and Veer van der, Gerrit and Breit, Timo and Nijholt, Anton (2007) Smart Environments for Collaborative Design, Implementation, and Interpretation of Scientific Experiments. In: Workshop on AI for Human Computing, AI4HC 2007, 6 January 2007, Hyderabad, India.

2006

Wassink, I. and Dijk van, B. and Zwiers, J. and Nijholt, A. and Brugman, A.M. (2006) In the Truman show: generating dynamic scenarios in a driving simulator. IEEE Intelligent Systems, 21 (5). pp. 28-32. ISSN 1541-1672

2005

Wassink, I. and Dijk van, E.M.A.G. and Zwiers, J. and Nijholt, A. (2005) Bringing Hollywood to the Driving School: Dynamic Scenario Generation in Simulations and Games. In: International Conference on INtelligent TEchnologies for interactive enterTAINment (INTETAIN 2005), Madonna di Campiglio, Italy.